Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905149.1_cds_XP_016455334.1_49273
CDS Infomation

[gene=LOC107779414] [db_xref=GeneID:107779414] [protein=polygalacturonase-like] [protein_id=XP_016455334.1] [location=join(6696..7136,8761..9050,9601..9826,10801..11028)] [gbkey=CDS]
Sequence

ATGGCCAATTTCAAAACCGTGAAATGTACTAATGTTTCTTGGTTACCTTTCTTTTGTTTA
TTAATACCTTCTTGTTTATCCTACAATGTAGTTAATTTTGGGGCTAGAGGAGATGGCAGG
ACAGACTCAACCAGAGCGTTTCTTCGCGCTTGGTCTGCTGCCTGCAACTCTGCTAGTCCA
GCGAACGTTGACGTTCCACGAGGAACATATTTAGTGAGGACGTTGACTTTCAATGGTCCT
TGTCGGAGAAGAATTATGTTTCGAATTGATGGTACTCTCAGTGCTCCGGTCAATTATAAC
GCAATTGGGAATTCTGAGTTCTGGATTATGTTTTATAAGGTAAGTGGGCTTTCAGTCTAT
GGATCAGGAGCTATTAACGCCAAAGGACATGGTTATTGGTCTTGTCGAAAAAGTGGAGGT
TCTTGCCCTCAAGGAGCTAGGTCAATACAATTCATGTGGTGTAACAATGTACTGCTGAGG
GGCTTAGCATCACTCCACAGTCAAAGAGTACATGTGGGAATAGGTTACAGCAGCAATGTG
AGAGTCGAGTATGTGAAGATAATAGCCCCAAGTGGAAGCCCAAACACCGATGGCATTCAT
GTACAAAACTCAAGGGGGGTTACCATTTATGGAAGCATTATTAAGACCGGAGATGACTGC
ATATCTATAGGCTCTGGCTCCATGAACTTATGGATTGAAAAAATTGGATGTGGCCCTGGA
CATGGCATTAGCATTGGAAGTTTGGGAAACAGCAACAATGAGCCTGGGGTTACGAATGTC
ACAGTAGCAAATTCGGTTTTCACAAAGACGCAAAATGGCGTTAGGATAAAGTCTTGGGCA
AGACCAAGTAATGGCTTTGCAAAAAATCTCATGTTCAAAAACCTTATTATGAGGAACGTT
GGGAATCCCATCATCATTGACCAAAACTATTGCCCGCATAATATGTGCCCTCGTCAGAGT
TCAGGAGTGAAGGTGAGTCAAGTAACATTCAAGAATGTGAAAGGGACATCATCTACACAA
GCAGCCATGAAATTTGACTGCAGTCCTTCAAATCCATGCACTGGAATCAGATTGCAAGAT
ATAAAGCTCACTTACAATGATCGCATGAGAAGGCCAGCCTTTACTTATTGTAAAAATGCA
AGGGGAAGCCATGGTGGCAAAGTTATTCCTAGGAGTTGCATCTGA

Peptide Sequence

PEP ID

XP_016455334.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MANFKTVKCTNVSWLPFFCLLIPSCLSYNVVNFGARGDGRTDSTRAFLRAWSAACNSASP
ANVDVPRGTYLVRTLTFNGPCRRRIMFRIDGTLSAPVNYNAIGNSEFWIMFYKVSGLSVY
GSGAINAKGHGYWSCRKSGGSCPQGARSIQFMWCNNVLLRGLASLHSQRVHVGIGYSSNV
RVEYVKIIAPSGSPNTDGIHVQNSRGVTIYGSIIKTGDDCISIGSGSMNLWIEKIGCGPG
HGISIGSLGNSNNEPGVTNVTVANSVFTKTQNGVRIKSWARPSNGFAKNLMFKNLIMRNV
GNPIIIDQNYCPHNMCPRQSSGVKVSQVTFKNVKGTSSTQAAMKFDCSPSNPCTGIRLQD
IKLTYNDRMRRPAFTYCKNARGSHGGKVIPRSCI

Transcript Sequence

Gene sequence data has not been registered.